Autofluorescence Is a Common Trait in Different Oceanic Fungi

Aug 29, 2021·
Eva Breyer
,
Markus Böhm
,
Magdalena Reitbauer
Chie Amano
Chie Amano
,
Marilena Heitger
,
Federico Baltar
· 1 min read
DOI
publication

Natural autofluorescence is a widespread phenomenon observed in different types of tissues and organisms. Depending on the origin of the autofluorescence, its intensity can provide insights on the physiological state of an organism. Fungal autofluorescence has been reported in terrestrial and human-derived fungal samples. Yet, despite the recently reported ubiquitous presence and importance of marine fungi in the ocean, the autofluorescence of pelagic fungi has never been examined. Here, we investigated the existence and intensity of autofluorescence in five different pelagic fungal isolates. Preliminary experiments of fungal autofluorescence at different growth stages and nutrient conditions were conducted, reflecting contrasting physiological states of the fungi. In addition, we analysed the effect of natural autofluorescence on co-staining with DAPI. We found that all the marine pelagic fungi that were studied exhibited autofluorescence. The intensity of fungal autofluorescence changed depending on the species and the excitation wavelength used. Furthermore, fungal autofluorescence varied depending on the growth stage and on the concentration of available nutrients. Collectively, our results indicate that marine fungi can be auto-fluorescent, although its intensity depends on the species and growth condition. Hence, oceanic fungal autofluorescence should be considered in future studies when fungal samples are stained with fluorescent probes (i.e., fluorescence in situ hybridization) since this could lead to misinterpretation of results.

Chie Amano
Authors
Associate Professor
Chie Amano is a marine microbial ecologist studying the role of bacteria and archaea in the ocean’s biogeochemical cycles, with a focus on the dark, deep ocean. Her research addresses both sides of the carbon cycle: the heterotrophic degradation of organic matter, including by particle-associated communities, and dark inorganic carbon fixation through anaplerotic and chemolithoautotrophic processes. She also examines how hydrostatic pressure shapes microbial activity and carbon cycling in the deep sea, and she develops single-cell approaches such as BONCAT and microautoradiography, together with in situ instrumentation, to quantify microbial activity in the deep ocean.